Edited by: Stephanie Plön, Stellenbosch University, South Africa
Reviewed by: Kristina Lehnert, University of Veterinary Medicine Hannover, Germany; Vanessa Estrade, GLOBICE REUNION, Réunion
*Correspondence: S. Wund,
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
Monitoring the health status of marine mammals is a priority theme that France aims to develop with the other European Union Member States in the next two years, in the context of the Marine Strategy Framework Directive. With approximately 5,000 km of coastline and for nearly ten years, France has been recording an average of 2,000 strandings per year, which are monitored by the National Stranding Network, managed by Pelagis, the observatory for the conservation of marine mammals from La Rochelle University and the French National Center for Scientific Research. Since 1972, this network has successively evolved from spatial and temporal faunistic description to, nowadays, the detection of major causes of mortality. It now aims to carry out epidemiological studies on a population scale. Thus, a strategy to strengthen the monitoring of marine mammals’ health status based on stranding data has been developed. This strategy will allow for a more accurate detection of anthropogenic cause of death as well as those of natural origin. It will allow the monitoring of time trends and geographical differences of diseases associated with conservation and public health issues while ensuring the early detection of emerging and/or zoonotic diseases of importance. It will also allow a better assessment of the consequences of human activities on these animal populations and on the environment. Thus, this strategy is fully in line with the “One Health” approach which implies an integrated vision of public, animal and environmental health. It is broken down into four surveillance modalities: (1) general event-based surveillance (GES); (2) programmed surveillance (PS); (3) specific event-based surveillance (SES); (4) and in the longer term, syndromic surveillance (SyS). This article describes the French strategy as well as these different surveillance modalities, the levels of examinations and the associated sampling protocols and finally, the method of standardisation of the data collected. The objective is to present the strategy developed at the French level in order to integrate it into a future strategy shared at the European level to standardise practices and especially complementary analysis, necessary for a better evaluation of the health status of these mobile marine species.
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Epidemiological surveillance of wildlife consists of monitoring the health status and risk factors in these animal populations (
Unlike terrestrial wildlife, the interactions between the health of marine mammals and human or domestic animal health may seem less obvious, given the more limited contact with marine mammals (
Therefore, many coastal countries in Europe and around the world have set up systems to record strandings and carry out
The French National Stranding Network (NSN) is coordinated by the Pelagis observatory in La Rochelle (Support and Research Unit, UAR 3462 La Rochelle University - French National Center for Scientific Research), appointed by the Ministry of Ecology to monitor the status of marine mammal populations and support the implementation of public conservation policies relating to these species. The monitoring of strandings makes it possible to meet the requirements linked to the regulated status of these species. For example, among the descriptors defined by MSFD and used to define Good Ecological Status (GES), marine mammals are involved in descriptor D1 “Biodiversity” and descriptor D8 “Contaminants” with the following expectations: (1) monitoring of coastal cetacean populations, (2) monitoring of seal populations, (3) monitoring of marine mammals at sea, (4) monitoring of marine mammal strandings, (5) monitoring of interactions with human activities, (6) monitoring of chemical contaminants in cetaceans. Thus, the monitoring of strandings is an integral part of this monitoring.
The NSN was created in 1972 as a natural science network. Since its beginnings, the network has relied on the participation of volunteers (correspondents), but over time it has become partially professional, with some correspondents such as field agents of the French Biodiversity Agency (
The French stranding network provides a case study: the conceptual framework will be confronted with reality, considering the objectives, structure, functioning and tools of the NSN, which will need to evolve further to better meet the requirements of the strategy. The limits and needs will be identified as well as the long-term prospects. The objective is to present the strategy developed at the French level (metropolitan and overseas) in order to integrate it into a future strategy shared at the European level to standardise practices and especially complementary analysis, necessary for a better evaluation of the health status of these mobile marine species.
The NSN is structured in a similar way to an epidemiological surveillance network, with the different levels of organisation being field, local, regional and central (
Organization of the NSN.
The national governance of the NSN is ensured by a Steering Committee (COPIL) made up of appointed members from different institutions (Pelagis, OFB, surveillance network for infectious diseases of birds and wild terrestrial mammals (SAGIR), National Museum of Natural History (NMNH), ministry in charge of Ecology), divers non-profit associations, members elected from among the NSN correspondents and invited experts. With the exception of the French Overseas Territories, coordination is carried out solely at national and not regional level, but depending on the region, data are sometimes centralised by a local representative correspondent. Technical and scientific support is provided by Pelagis. The network’s coordination unit, known as the “stranding team”, is located within Pelagis. To date, only two laboratories have signed agreements at regional level (LABOCEA in Ploufragan and Department of Morphology and Pathology of the Faculty of Veterinary Medicine in Liège).
Carcass data are collected in the field according to standard protocols by authorised NSN correspondents or in NSN associated laboratories. These authorisations (called “green card”) are allocated by the ministry in charge of Ecology, subsequent to the training delivered by Pelagis. The application of the various protocols (biometrics, standardised photographs, external examination, internal examination, necropsy and sampling) will depend on the state of decomposition of the animal, the level of training of the correspondent and the logistical means available (transport and storage of the carcass, storage of samples, etc.) (
Summary of the examination levels and sampling protocols.
Data on individual’s health and cause of death | Biological, |
Maximal DCC | |||
---|---|---|---|---|---|
Examination type | |||||
|
L1 | External examination | Body condition |
Species |
3 |
L2 | External examination + partial internal examination | Body condition |
|||
L3 | External examination + complete internal examination | Body condition |
|||
L4 | Necropsy |
Body condition |
|||
Sampling | |||||
|
P1 | Teeth | – | Age | 5 |
P2 | P1 + blubber, muscle, stomach, liver, kidney, gonads | – | Age |
3 | |
P3 | P2 + lymph nodes, blubber, muscle, spleen, pancreas, stomach, intestine, liver, adrenal gland, kidney, bladder, thyroid, thymus, heart, lungs, brain, tympanic bulla, foetal tissues, parasites | Systematic and standardised analyses: microscopical lesion (histopathological analysis) and pathogens (bacteriological agents, virus, mycotic agents, toxins, parasites) | Age |
2 | |
P0 | Different for each case | Analyses for diagnostic purposes, non-standardised, based on a specific context and/or macroscopical lesions | – | 3 |
All the information is finally centralised by the stranding team and integrated into a database. The data, once standardised, are made available for studies by external entities. A tissue bank is also set up and available for research projects. Each year, approximatively thirty agreements for the use of biological samples are drawn up with external organisations. The data analysis and the studies’ results carried out by the observatory itself give rise to scientific publications, the annual stranding report, publications on the website and are also presented at an annual seminar which brings together the network’s correspondents and stakeholders.
Finally, the annual operating budget of the network managed by Pelagis can be divided into four main components: scientific and administrative coordination, human resources, interventions and sample analysis. The ministry in charge of ecological transition, as well as the supervisory institutions of Pelagis, which are the French National Center for Scientific Research and La Rochelle University, funds the coordination of the NSN. The stranding team and the interventions are mainly supported by the OFB and La Rochelle city. Depending on the year, the budget allocated to sample analysis varies and is supported by the OFB, the ministry and regional, national or European projects. The budget managed by Pelagis for stranding activities is estimated between €400,000 and €600,000 per year, depending on the projects integrating sample and data analysis. Finally, a large part of the NSN’s operation is ensured by the self-financing of the network’s stakeholders, which can be broken down as follows: valuation of the correspondents’ voluntary work, participation of non-profit organizations making use of their financial resources, provision of OFB agents, technical services of municipalities, prefectures and other structures, provision of premises or equipment by these same structures.
There are different tools for valuing strandings that correspond to the levels of examination and sampling protocols carried out on the carcasses. Thus, depending on the operator and his training, four levels of examination and three standardised sampling protocols can be carried out (
The first examination level (L1) is an external examination associated to six standardised photographs (
The six standardised photos, © PELAGIS.
Skin lesion in external view
The second level of examination (L2) used to consist of performing the L1 and opening cavities in a second stage, in order to perform the samples of the P2 protocol, intended mainly for ecological analysis. This level has been significantly modified and from now on correspondents will be trained to describe some main organs (descriptive criteria: volume, shape, colour, consistency,
Organs described and photographed at L2 in a cetacean,
The third examination level (L3) is divided into two phases. The first step consists in the production of a dissection report by a trained NSN’s correspondent (biologist or veterinarian), which includes the external examination and a detailed description of all internal organs, supported by photographs. The second phase is the interpretation and validation of this report by an experienced veterinarian who can then conclude, when possible, on the cause of death. This level has been developed by Pelagis in 2019 as part of a veterinary thesis (
The fourth examination level (L4) corresponds to a necropsy performed by an experienced veterinarian with consolidated knowledge of marine mammal pathology and who has performed numerous necropsies on these species. The necropsy is performed according to an adapted standard protocol (
In addition to the
In addition to the standardised protocols, P1, P2 and P3, other samples for diagnostic purposes (P0) may be taken at the request of Pelagis or by the veterinarian in charge of the necropsy, who will then determine the analysis to be performed.
Reported stranding numbers are the result of four parameters: species abundance at sea, mortality, drift conditions and reporting. The first two are biological variables, while the next two depend on weather conditions and carcass buoyancy, and the last one on the probability of sighting and the observer’s ability or willingness to report the stranding (
The first factors recorded are the specie and sex identification, the biometric data and spatial and temporal distributions of the stranded marine mammals, allowing to follow the trends of the stranding rates and to highlight unusual mortality events. Indeed, changes in these parameters can be indicative of modifications in abundance, mortality, distribution or of pressures affecting marine mammal populations. Diversity within the marine mammal community can also be assessed (
Morphological alterations caused by interactions with fishing gear (net imprints) – Common dolphin, February 2019, Rivedoux (17), © PELAGIS.
Amputations of appendages and perforations carried out during stripping operations – Common dolphin, March 2022, Bretignolles-Sur-Mer (85), © PELAGIS.
Nevertheless, only a necropsy (
According to the stranding database and the annual reports produced by Pelagis, more than 2,000 strandings have taken place each year since 2016. More than 60% of strandings have occurred on the Atlantic coast, around 25% on the Channel and North Sea coast and less than 5% on the Mediterranean coast. More than thirty species of marine mammals have already stranded in metropolitan France. However, the vast majority of strandings (percentage 2016-2021) are represented by only eight species: common dolphin (
The causes of mortality identified through
Among the causes of natural death are those of infectious origin. In recent decades, numerous pathogens have been isolated from marine mammals worldwide (
Finally, in recent years, live strandings of cetaceans have represented around 5% of strandings in metropolitan France (
In 2022, the French news highlighted several cases of out of habitat marine mammals, notably a killer whale (
In order to meet the objectives of Pelagis and to optimise the use of data obtained from strandings, the strengthening of health monitoring will be based on four methods (
Summary of the four monitoring modalities.
Surveillance modalities | Associated levels and protocols | Concerned strandings | Objectives |
---|---|---|---|
General event-based surveillance (GES) | Every level |
All reported strandings | Monitoring of the spatio-temporal distribution of strandings |
Programmed surveillance (PS) | N4 |
≈ 100 individuals |
Acquisition of knowledge and data for epidemiological studies |
Specific event-based surveillance (SES) | Every level |
Rare species |
Strengthening of surveillance on cases defined as priorities |
Syndromic surveillance (SyS) | According to the indicators monitored | Continuous collection, according to the indicators monitored | Early detection via algorithms of expected (or unexpected) phenomena and assessment of the impact (or lack of impact) of a phenomena |
General event-based surveillance is the monitoring modality that will focus on stranding as an event. It will be based on spontaneous reporting of strandings by the general public. This monitoring has been carried out by the NSN for nearly 40 years and must be maintained as part of the health monitoring strategy developed, as it may help to identify the causes of mortality. The main parameter measured by this modality will be the spatio-temporal distribution of strandings. For example, using reverse drift models, the presumed area of mortality at sea can be defined, which will make it possible to identify possible threats to these animals in this area and thus obtain hypotheses on the cause of death (
Programmed surveillance (PS) is a surveillance modality that will involve individuals being subjected to necropsy (L4) and to the P3 sampling protocol which is specific to this modality.
Logistical and financial constraints limit the application of the PS to 100 fresh carcasses per year (DCC 1 or DCC 2 without freezing). Therefore, a sampling plan is proposed to represent the stranded marine mammal population. This plan describes the number of animals expected for each species, by seaboard and by quarter, proportionally reduced for a total of 100 individuals per year based on the last five years of consolidated data, for which all the data are available (from 2016 to 2020 for the 2023 plan). Any stranded animal that falls within this sampling will have to be handled by the PS modality until the quotas are reached. If the expected number of animals for a species, seaboard and quarter is not reached, the animals will be analysed/investigated in the next quarter.
Systematic necropsies accompanied by standardised analysis will allow descriptive epidemiology to be carried out by revealing the circulation of pathogens in these animals and measuring it in time and space. The prevalence of some agents (morbillivirus,
Moreover, obtaining complete lesion tables and numerous laboratory results makes it possible to carry out analytical epidemiology, in particular by conducting case-control studies to measure the effect of exposure to factors on the incidence of diseases or other events. Through this type of study already conducted abroad, it has been possible for example to demonstrate the existence of a positive correlation between exposure to polychlorinated biphenyls (PCBs) and the incidence of infectious diseases in harbour porpoises in Great Britain (
Specific event-based surveillance is a monitoring modality in which some stranding events will be investigated in depth to meet conservation, public health or knowledge acquisition objectives. These events are called “cases”. They will be revised each year or more regularly depending on the epidemiological context. This surveillance method will be based on spontaneous reporting of cases at the time of reporting by the general public or by the network’s correspondents when they intervene on the stranding field. The SES has thus been established to allow for enhanced monitoring of the following three main categories of cases, each with specific objectives: (1) enhanced monitoring of the health status of critical species and emblematic species for knowledge or conservation purposes; (2) enhanced monitoring of phenomena of interest for knowledge, conservation and public health purposes; (3) enhanced monitoring of diseases of interest for conservation and public health issues and to guarantee early warning (epidemiological vigilance).
All species that have never or rarely been observed stranded on a coastline and for which in-depth investigations are required are considered critical. Emblematic species are the animals already included in the strategy for monitoring contaminants in cetaceans on the French coast established by Pelagis within the framework of the MSFD (
Phenomena of particular interest are considered to be situations corresponding to unusual mortality events and/or revealing the consequences of anthropic activities on marine mammal populations. The phenomena selected are: (1) mass strandings, (2) multiple unexplained strandings, (3) strandings suspected of being associated with noise pollution, (4) strandings suspected of being associated with acute chemical pollution, (5) lesions suspected of being of intentional anthropogenic origin and, finally, (6) strandings suspected of being related with marine biotoxins.
For diseases of priority interest, it was agreed to focus on those with known conservation or public health issues that have already had an impact in regional waters, such as avian influenza and morbilliviruses.
Each case is defined according to criteria such as the species concerned, the geographical area, the time window or the warning signs. The definition of cases must be sensitive enough to guarantee detection but also specific enough to avoid having to treat too many animals, which would not be logistically and financially feasible. For each of these cases, a procedure is established. It defines the level of examination to be carried out and a specific sampling protocol (P0) which is different for each case. Technical notes including the definition of the case, the interest of reinforcing surveillance and the procedure to follow will be made available to all the network’s correspondents.
Syndromic surveillance will consist of the continuous collection, analysis and interpretation of health indicators to ensure a rapid assessment of the impact of health risks on the health of the population monitored. The continuous signal will allow the production of a time series,
Only the “mortality” indicator will be systematically surveyed at short term. This will make it easier to detect mortality peaks or mortality events associated with identified phenomena. In the longer term, other indicators could be monitored continuously, such as the presence of pathogens or specific lesions as neoplasms. SyS will be carried out on all reported stranded animals. However, it will not always be possible to obtain data on all indicators for each animal as this will depend on the level of examination and analysis carried out. This monitoring modality will require a consolidated database with rapid and systematic integration of the indicators monitored and standardisation of the lexicon used to describe them. It will also require the development of adequate algorithms and a good interpretation of the results obtained.
Large-scale standardised data integration has been developed to facilitate data analysis and comparison between the different information obtained from strandings. This standardisation will also facilitate the exchange of data with stranding networks in neighbouring countries. Thus, a major effort has been made to harmonise data on causes of death, lesions identified during necropsies and the results of additional analysis.
Individual cause of death data should be systematically included as follows: (1) initial cause of death (mandatory); (2) immediate cause of death (optional); (3) degree of certainty associated with the diagnosis of the initial cause of death (mandatory); (4) contributory causes (optional); (5) anthropogenic origin of the initial cause of death (mandatory). In addition, a commentary may accompany these data to provide details of the cause of death such as a pathogen involved.
The initial cause of death must be completed with one of the death cause categories defined (
Categories and sub-categories of initial causes of death.
CATEGORY | SUBCATEGORY |
---|---|
|
• Undetermined origin |
|
• Undetermined origin |
|
• Undetermined origin |
|
• Euthanasia |
|
• Undetermined origin |
Definitions of level of certainty according to the level of examination (L) performed.
Level of certainty | Examination level L1 & L2: opinion on cause of death | Examination level L3 & L4: veterinary diagnosis |
---|---|---|
1 | No evidence | No conclusion |
2 | Suggestive evidence | Hypothesis of diagnosis |
3 | Evidence | Diagnosis of suspicion |
4 | Strong evidence (L2 required) | Diagnosis of well-founded suspicion |
5 | Proven cause | Definitive diagnosis (additional analysis required) |
Finally, it will be stated whether the initial cause of death has an anthropogenic origin or not. A commentary may be added to clarify the cause of death. For example, in the case of a natural death of infectious origin, it could be stated that it was a pneumonia compatible with a bacterial origin according to the macroscopic lesions.
In order to facilitate analysis of the data obtained during necropsies on a population scale, the terms used to define organs and lesions, as well as the results of the complementary analysis, were standardised.
Thus, the list of organs is broken down into three levels as done in the SAGIR vademecum (
Similarly, lesions detected on macroscopic examination and histological analysis are broken down into three levels which are analyte category, analyte and sub-analyte. The analyte categories are: morphological abnormality, content, inflammatory, mechanical and traumatic, metabolic, proliferative and finally vascular. The analyte and sub-analyte help to specify the nature of the lesion. For example, for a vascular lesion it could be hemorrhage and petechiae for the analyte and sub-analyte respectively. The severity of the injury will be specified (mild to severe) as well as the duration of the condition (acute to chronic). Measurements may be added and the time of onset specified (
Finally, all data from additional analysis (excluding histology) will also be integrated in a standardised way. The nature of the analysis, the method used, the presence of a positive or negative signal will be specified. The result will be broken down into three levels which are again the analyte category, the analyte and the sub-analyte. The analyte categories are numerous and include for example bacteria, viruses, parasites, fungi, toxins or contaminants. The analyte and sub-analyte will help to specify the agent of interest. In the case of biological agents, these are the genus and species respectively. Finally, the veterinarian should specify whether the agent in question is considered to have caused disorders in the animal’s lifetime.
The health monitoring of marine mammals as presented here is an ambitious project requiring as many stranding data as possible. Pelagis’ first ambition was to improve its means of expertise in order to conclude with more precision and certainty on the causes of mortality. The development of these means was the opportunity to reinforce the global health monitoring of marine mammal populations. This strategy will allow to improve the knowledge of the health status of these species subjected to numerous pressures by following the evolution in time and space of diseases associated with conservation and public health issues while ensuring the early detection of emerging and/or zoonotic diseases of importance. It will also allow a better assessment of the consequences of anthropic activities on these animal populations and on the environment.
The high number of strandings in metropolitan France, combined with logistical, financial and human resources, imply that the highest level of examinations cannot be implemented on every stranded marine mammal. Thus, a strategy with different surveillance modalities has been established, allowing us to choose the individuals on which the most in-depth investigations will be carried out, while representing at best the stranded marine mammal population. The strategy, based on four surveillance modalities which are general event-based surveillance, programmed surveillance, specific event-based surveillance and syndromic surveillance should imply many evolutions. Among these, the main ones are the dissemination of expertise means and their appropriation by the network actors, the ability to meet the sampling plan and the appropriation of the P3 sampling protocol within the framework of the programmed surveillance and the integration of standardised data (standardized samples and analysis), which imply a significant reorganisation of the database structure.
The systematic performance of standardized analyses within the framework of the PS will make it possible to carry out descriptive epidemiology by identifying the health problems of populations and by measuring them in time and space. In addition to being able to infer the results obtained to a reference population, the laboratory analyses that complete the necropsy allow the cause of death to be investigated with greater precision.
Various criteria were considered in order to define the reference population for the sampling plan to conduct the PS. Emblematic Species already included in the strategy for monitoring contaminants in cetaceans (bottlenose dolphin for the 3 metropolitan seaboards, common dolphin for the Atlantic coast, harbour porpoise for the English Channel coast and stripped dolphin for the Mediterranean coast) on the French coast established by Pelagis within the framework of the MSFD were considered as a priority (
Morevover, as these are mobile species that should be considered on a basin or regional scale, collaborations with neighbouring countries where strandings of animals from the same populations as those occurring on our coasts will be necessary. Although necropsy and common sampling protocols have already been proposed on a European scale, the situation is different for routine analysis (
The choices concerning standardised routine analysis within the framework of P3 and therefore of programmed surveillance were made according to several criteria: the improvement of knowledge and the interests for conservation and public health in relation to the financial cost and technical and logistical feasibility (easy access to laboratory techniques).The post mortem investigation and tissue sampling protocol already established under the auspices of ASCOBANS (Agreement on the Conservation of Small Cetaceans of the Baltic, North East Atlantic, Irish and North Seas) and ACCOBAMS (
The results of analysis carried out on carcasses, although they are of DCC 1 or 2, should be interpreted with caution, particularly for bacteriological analysis, due to possible
Epidemiological vigilance will be ensured by the different modalities, in particular for cases managed with specific event-based surveillance. The example of the major avian influenza outbreak in Europe in 2022 (
Beyond the defined strategy,
Many aspects of the strategy are based on data obtained over the last five years for which all the information is already available (2016 to 2020). This arbitrary choice of a relatively short period was made to consider population shifts and changes in the environment (environmental parameters, fishing practices, construction of offshore parks…) and to try to be as close as possible to what might happen in the coming year. The time windows of the MSFD could possibly be used as early as 2025 (beginning of the third MSFD cycle) in order to harmonise the strategies.
Generally speaking, the strategy for strengthening health surveillance developed by Pelagis provides a framework that allows all the actors in the NSN to be informed of the approach followed and to understand its ins and outs. Thus, the effort of training (a 3 days initial training is required to incorporate the NSN, and retraining every five years at least, concurrently with the evolution of protocols) and informing correspondents is essential to guarantee their support and investment in the project and to limit operator bias harmonising practices. It is also important to continue to train new correspondents at the various levels, as the more numerous they are, the greater the number of animals evaluated.
The overall cost of this strategy, implemented in January 2023, is significant mainly due to the laboratory analysis carried out within the framework of the PS, which are added to the logistical costs of managing strandings. The discussions that will be conducted by the working group on the prioritisation of health hazards should make it possible to reach a compromise between the benefits of these analysis and the associated cost in the next two years.
Although there are many constraints to strengthening health monitoring, the structure of the NSN is very similar to that of an epidemiological surveillance network, which makes it a major strength. Moreover, the network has already proven its capacity to detect almost all strandings and to collect data on a large scale in space and time.
Similarly, health monitoring should focus on live marine mammals too. This mainly concerns pinnipeds, including those entering care centres before being released, but also live cetacean strandings. Finally, marine mammal populations in French overseas waters that face different problems to those in metropolitan France should also be subject to health monitoring.
The original contributions presented in the study are included in the article/supplementary material. Further inquiries can be directed to the corresponding author.
The main work was carried out by SW under the guidance of FC, and with the main support of EM. All authors contributed to the article and approved the submitted version.
We would like to thank the veterinarians implicated in this work for their valuable help and their enthusiasm. We are grateful to all the members of the French stranding scheme for their continuous effort in collecting data on stranded cetaceans. The Observatoire PELAGIS is funded by the Ministry in charge of the Environment, the French Office for Biodiversity (Office Français pour la Biodiversité—AFB) and the Communauté d’Agglomération de la Ville de La Rochelle.
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
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